This lesson is still being designed and assembled (Pre-Alpha version)

Single-cell RNA-Seq Analysis: Glossary

Key Points

Introduction to scRNA-seq
  • scRNA-seq offers many advantages over bulk RNA-seq

  • scRNA-seq requires more pre-processing than bulk RNA-seq

scRNA-seq Workflow
  • scRNA-seq requires much pre-processing before analysis can be performed.

Pre-processing of scRNA-seq using Cellranger
  • scRNA-seq requires much pre-processing before analysis can be performed.

Quality Control & Normalization
  • scRNA-seq requires much pre-processing before analysis can be performed.

Trimming and Filtering
  • The options you set for the command-line tools you use are important!

  • Data cleaning is an essential step in a genomics workflow.

Glossary

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