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High-Performance Computing Carpentry
    High-Performance Computing Carpentry
    HPC Workflow Management with Snakemake
    • HPC Workflow Management with Snakemake
    • Key Points
    • Instructor Notes
    • Extract All Images

      • Reference
    Search the All In One page
    Search the All In One page
  • Learner View
    Summary and Schedule
    1. Running commands with Snakemake
    2. Running Snakemake on the cluster
    3. Placeholders
    4. MPI applications and Snakemake
    5. Chaining rules
    6. Processing lists of inputs

    • Key Points
    • Instructor Notes
    • Extract All Images


    • Reference

    See all in one page

    Instructor Notes

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    Running commands with Snakemake


    Running Snakemake on the cluster


    Placeholders


    MPI applications and Snakemake


    Chaining rules


    Processing lists of inputs



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