This lesson is in the early stages of development (Alpha version)

Introduction to Working with MRI Data in Python: Glossary

Key Points

Before we start
  • Python is an open source and platform independent programming language.

  • Jupyter Notebook is a great tool to code in and interact with Python.

  • With the large Python community it is easy to find help on the internet.

From the scanner to our computer
Anatomy of a NIfTI
Data organization with BIDS
Exploring open MRI datasets
  • BIDS is an organizational principle for neuroimaging data

  • PyBIDS is a Python-based tool that allows for easy exploration of BIDS-formatted neuroimaging data

BIDS derivatives