This lesson is in the early stages of development (Alpha version)

Genome Mining Workshop Overview: Prerequisites

Reproducibility

Containers and clouds are good practices for Repetibility.

Linux commands

This section contains the linux commands that will be in use during the workshop. Eventually the should consitute its own introductory lesson.

command description
wget get content from a website
gunzip decompress a file
PS1=’$ ‘ Change prompt view to ‘$ ‘
echo  
pwd  
ls  
mkdir -p  
cd  
wc  
head  
tail  
tree  
mv  
rm  
sh (script structure)  
for  
while  
while read line  
find  
ln -s Links simbolicos  
rename  
cut -d’ ‘ -f  
firefox  
scp  
ssh  
more  
grep  
>  
»