class: center, middle, inverse, title-slide # Non-metric multi-dimensional scaling (optional lesson) --- # plot of chunk schematic <img src="data:image/png;base64,#/home/alan/Documents/github/carpentries/high-dimensional-stats-r/fig/microbiome_schematic.png" width="100%" /> --- # plot of chunk species-site1d <img src="data:image/png;base64,#/home/alan/Documents/github/carpentries/high-dimensional-stats-r/fig/one_dimension_species_vs_site.png" width="100%" /> --- # plot of chunk species-site2d <img src="data:image/png;base64,#/home/alan/Documents/github/carpentries/high-dimensional-stats-r/fig/two_dimension_species_vs_site.png" width="100%" /> --- # plot of chunk stressplot <img src="data:image/png;base64,#/home/alan/Documents/github/carpentries/high-dimensional-stats-r/fig/rmd-07-stressplot-1.png" width="100%" /> --- # plot of chunk k-ex <img src="data:image/png;base64,#/home/alan/Documents/github/carpentries/high-dimensional-stats-r/fig/rmd-07-k-ex-1.png" width="100%" /> --- # plot of chunk ordplot1 <img src="data:image/png;base64,#/home/alan/Documents/github/carpentries/high-dimensional-stats-r/fig/rmd-07-ordplot1-1.png" width="100%" /> --- # plot of chunk ordplot2 <img src="data:image/png;base64,#/home/alan/Documents/github/carpentries/high-dimensional-stats-r/fig/rmd-07-ordplot2-1.png" width="100%" /> --- # plot of chunk ordplot3 <img src="data:image/png;base64,#/home/alan/Documents/github/carpentries/high-dimensional-stats-r/fig/rmd-07-ordplot3-1.png" width="100%" /> --- # plot of chunk ordplot-ex <img src="data:image/png;base64,#/home/alan/Documents/github/carpentries/high-dimensional-stats-r/fig/rmd-07-ordplot-ex-1.png" width="100%" /> --- # plot of chunk ordplot-ex <img src="data:image/png;base64,#/home/alan/Documents/github/carpentries/high-dimensional-stats-r/fig/rmd-07-ordplot-ex-2.png" width="100%" /> --- # plot of chunk ordplot-ex <img src="data:image/png;base64,#/home/alan/Documents/github/carpentries/high-dimensional-stats-r/fig/rmd-07-ordplot-ex-3.png" width="100%" /> --- # plot of chunk ordplot-ex <img src="data:image/png;base64,#/home/alan/Documents/github/carpentries/high-dimensional-stats-r/fig/rmd-07-ordplot-ex-4.png" width="100%" /> --- # plot of chunk ordplots-123 <img src="data:image/png;base64,#/home/alan/Documents/github/carpentries/high-dimensional-stats-r/fig/rmd-07-ordplots-123-1.png" width="100%" /> --- # plot of chunk ordplots-123 <img src="data:image/png;base64,#/home/alan/Documents/github/carpentries/high-dimensional-stats-r/fig/rmd-07-ordplots-123-2.png" width="100%" /> --- # plot of chunk ordplots-123 <img src="data:image/png;base64,#/home/alan/Documents/github/carpentries/high-dimensional-stats-r/fig/rmd-07-ordplots-123-3.png" width="100%" /> ---